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Int J Biol Macromol ; 163: 1-8, 2020 Nov 15.
Article in English | MEDLINE | ID: covidwho-620551

ABSTRACT

The current pandemic of 2019 novel coronavirus disease (COVID-19) caused by a novel virus strain, 2019-nCoV/SARS-CoV-2 have posed a serious threat to global public health and economy. It is largely unknown how the human immune system responds to this infection. A better understanding of the immune response to SARS-CoV-2 will be important to develop therapeutics against COVID-19. Here, we have used transcriptomic profile of human alveolar adenocarcinoma cells (A549) infected with SARS-CoV-2 and employed a network biology approach to generate human-virus interactome. Network topological analysis discovers 15 SARS-CoV-2 targets, which belongs to a subset of interferon (IFN) stimulated genes (ISGs). These ISGs (IFIT1, IFITM1, IRF7, ISG15, MX1, and OAS2) can be considered as potential candidates for drug targets in the treatments of COVID-19. We have identified significant interaction between ISGs and TLR3 agonists, like poly I: C, and imiquimod, and suggests that TLR3 agonists can be considered as a potential drug for drug repurposing in COVID-19. Our network centric analysis suggests that moderating the innate immune response is a valuable approach to target COVID-19.


Subject(s)
Betacoronavirus/genetics , Coronavirus Infections/genetics , ELAV-Like Protein 2/genetics , ELAV-Like Protein 2/metabolism , Pneumonia, Viral/genetics , A549 Cells , Antiviral Agents/pharmacology , Betacoronavirus/immunology , COVID-19 , Coronavirus Infections/immunology , Coronavirus Infections/virology , Drug Repositioning , ELAV-Like Protein 2/immunology , Gene Regulatory Networks , Humans , Immunity, Innate , Interferon-gamma/immunology , Interferon-gamma/pharmacology , Pandemics , Pneumonia, Viral/immunology , Pneumonia, Viral/virology , Protein Interaction Maps/genetics , SARS-CoV-2 , Signal Transduction , Transcriptome
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